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Journal Articles

• H. Nagel, W. Janke
  Dynamics of condensate formation in stochastic transport with pair-factorized steady states: Nucleation and coarsening time scales
  (arXiv:1602.01118) Phys. Rev. E 93, 052112 (2016)

• H. Nagel, W. Janke
  Emergence of dynamic phases in the presence of different kinds of open boundaries in stochstic transport with short-range interactions
  (arXiv:1508.00619) J. Stat. Mech.: Theory Exp. P013207 (2016)

• J.K. Ochab, H. Nagel, W. Janke, B. Waclaw
  A simple non-equilibrium, statistical-physics toy model of thin-film growth
  (arXiv:1506.03483) J. Stat. Mech.: Theory Exp. P09013 (2015)

• H. Nagel, H. Meyer-Ortmanns, W. Janke
  Boundary drive induced formation of aggregate condensates n stochastic transport with short-range interactions
  (arXiv:1507:06157) EPL 111, 30001 (2015)

• H. Nagel, D. Labavić, H. Meyer-Ortmanns, W. Janke
  Open boundary conditions in stochastic transport processes with pair-factorized steady states
  (arXiv:1506.01636) Phys. Proc. 57 77 (2014)

• E. Ehrenpreis, H. Nagel, W. Janke
  Numerical survey of the tunable condensate shape and scaling laws in pair-factorized steady states
  (arXiv:1506.01641) J. Phys. A: Math. Theor. 47, 125001 (2014)

• D. Labavić, H. Nagel, W. Janke, H. Meyer-Ortmanns
  Caveats in modeling a common motif in genetic circuits
  (arXiv:1209.0581) Phys. Rev. E 87, 062706 (2013)

• A. Garai, B. Wacław, H. Nagel and H. Meyer-Ortmanns
  Stochastic Description of a Bistable Frustrated Unit
  (arXiv:1201.2361) J. Stat. Mech.: Theory Exp. P01009 (2012)

Conference Posters

• H. Nagel, J. Vollmer, W. Janke
  Application of a steady statestransport model to condensation of water droplets on a substrate
  Diffusion Fundamentals V Leipzig (2013) PDF

• E. Ehrenpreis, H. Nagel, W. Janke
  Numerical survey of the tunable condensate and scaling laws in pair-factorized steady states
  PDF

• H. Nagel, D. Labavić, W. Janke, H. Meyer-Ortmanns
  Stochastic Description of a Binary Frustrated Unit
  DPG Spring Meeting Berlin 2012 Berlin (2012) PDF

• H. Nagel, B. Wacław, W. Janke
  Time Scale of Mass Condensation in Stochastic Transport with Pair-Factorized Steady States
  CompPhys 09 Leipzig (2009) PDF

• H. Nagel, P. Białas, B. Wacław, W. Janke
  Monte Carlo Generation of Equilibrated Graphs
  MECO34 Leipzig (2009) PDF

Diploma Thesis

Mass Condensation in Stochastic Transport Process and Complex Networks
Leipzig University (2010) PDF

Simulation toolkits

• Monte Carlo Generation of Complex Graphs
  Graphgen is a C++ template library written to ease the generation of complex graphs with prescribed structural / statistical properties.

• Monte Carlo simulation of condensation phenomena in stochastic transport
  stransport is a C++ template library for the numerical simulation of stochastic transport processes with a focus on condensation phenomena. It supports different types of dynamics (zero-range and short-range), simulation methods (simulation of the steady state as well as the dynamics) and computation of observables on a number of different topological structures (lattices to arbitrary graphs).